Global freshwater distribution of Telonemia protists
Roudaina Boukheloua
(1, 2)
,
Indranil Mukherjee
(1, 2)
,
Hongjae Park
(1, 2)
,
Karel Šimek
(1, 2)
,
Vojtěch Kasalický
(1, 2)
,
Maxon Ngochera
(3)
,
Hans-Peter Grossart
(4, 5)
,
Antonio Picazo-Mozo
(6, 7)
,
Antonio Camacho
(6, 7)
,
Pedro Cabello-Yeves
(6, 7)
,
Francisco Rodriguez-Valera
(8, 9)
,
Cristiana Callieri
(10)
,
Adrian-Stefan Andrei
(11, 12)
,
Jakob Pernthaler
(11, 12)
,
Thomas Posch
(11, 12)
,
Albin Alfreider
(13, 14)
,
Ruben Sommaruga
(13, 14)
,
Martin Hahn
(15, 14)
,
Bettina Sonntag
(15, 14)
,
Purificación López-García
(16)
,
David Moreira
(16)
,
Ludwig E Jardillier
(16)
,
Cécile Lepère
(17)
,
Corinne Biderre-Petit
(17)
,
Anna Bednarska
(18, 19)
,
Mirosław Ślusarczyk
(18, 19)
,
Viktor Tóth
(20)
,
Horia Banciu
(21)
,
Konstantinos Kormas
(22)
,
Sandi Orlić
(23)
,
Danijela Šantić
(24)
,
Gerard Muyzer
(25, 26)
,
Daniel Herlemann
(27, 28)
,
Helen Tammert
(28)
,
Stefan Bertilsson
(29)
,
Silke Langenheder
(30, 31)
,
Thomas Zechmeister
(32)
,
Nico Salmaso
(33)
,
Nicola Storelli
(34)
,
Camilla Capelli
(35)
,
Fabio Lepori
(35)
,
Vojtěch Lanta
(36)
,
Helena Henriques Vieira
(1)
,
Fran Kostanjšek
(1)
,
Kateřina Kabeláčová
(1)
,
Maria-Cecilia Chiriac
(1)
,
Markus Haber
(1)
,
Tanja Shabarova
(1)
,
Clafy Fernandes
(1)
,
Pavel Rychtecký
(1)
,
Petr Znachor
(1)
,
Tiberiu Szőke-Nagy
(1)
,
Paul Layoun
(1)
,
Hon Lun Wong
(1)
,
Vinicius Silva Kavagutti
(1)
,
Paul-Adrian Bulzu
(1)
,
Michaela Salcher
(1)
,
Kasia Piwosz
(1)
,
Rohit Ghai
(1)
1
Department of Aquatic Microbial Ecology , Institute of Hydrobiology, Biology Centre of the Czech Academy of Sciences
2 BIOLOGY CENTRE CAS - Biology Centre of the Czech Academy of Sciences
3 Department of Fisheries, Ministry of Natural Resources and Climate Change
4 IGB - Leibniz Institute of Freshwater Ecology and Inland Fisheries
5 University of Potsdam = Universität Potsdam
6 Cavanilles Institute of Biodiversity and Evolutionary Biology
7 UV - Universitat de València
8 Evolutionary Genomics Group , Departamento de Producción Vegetal y Microbiología, Universidad Miguel, Hernández,
9 UMH - Universidad Miguel Hernández [Elche]
10 IRSA - CNR Water Research Institute
11 Limnological Station , Department of Plant and Microbial Biology, University of Zurich
12 UZH - Universität Zürich [Zürich] = University of Zurich
13 Lake and Glacier Ecology Research Group , Department of Ecology, University of Innsbruck
14 Universität Innsbruck [Innsbruck]
15 Research Department for Limnology , Mondsee, University of Innsbruck
16 ESE - Ecologie Systématique et Evolution
17 LMGE - Laboratoire Microorganismes : Génome et Environnement
18 Department of Hydrobiology , Faculty of Biology, Institute of Ecology, Biological and Chemical Research Centre, University of Warsaw
19 UW - University of Warsaw
20 Aquatic Botany and Microbial Ecology Research Group, HUN-REN Balaton Limnological Research Institute
21 Department of Molecular Biology and Biotechnology , Faculty of Biology and Geology, Babeş-Bolyai University
22 Department of Ichthyology and Aquatic Environment, School of Agricultural Sciences, University of Thessaly, Greece
23 Division of Materials Chemistry, Ruđer Bošković Institute
24 Laboratory of Marine Microbiology, Institute of Oceanography and Fisheries
25 Department of Freshwater and Marine Ecology , Institute for Biodiversity and Ecosystem Dynamics, University of Amsterdam
26 UvA - University of Amsterdam [Amsterdam] = Universiteit van Amsterdam
27 IOW - Leibniz Institute for Baltic Sea Research Warnemünde
28 EMU - Estonian University of Life Sciences
29 Department of Aquatic Sciences and Assessment, Swedish University of Agricultural Sciences
30 Department of Ecology and Genetics/Limnology, Uppsala University
31 Uppsala University
32 BIOLOGICAL STATION LAKE NEUSIEDL ILLMITZ AUT
33 FEM - Fondazione Edmund Mach - Edmund Mach Foundation [Italie]
34 Institute of Microbiology, University of Applied Sciences and Arts of Southern Switzerland
35 Institute of Earth Sciences, University of Applied Sciences and Arts of Southern Switzerland
36 Department of Functional Ecology, Institute of Botany of the Czech Academy of Sciences
2 BIOLOGY CENTRE CAS - Biology Centre of the Czech Academy of Sciences
3 Department of Fisheries, Ministry of Natural Resources and Climate Change
4 IGB - Leibniz Institute of Freshwater Ecology and Inland Fisheries
5 University of Potsdam = Universität Potsdam
6 Cavanilles Institute of Biodiversity and Evolutionary Biology
7 UV - Universitat de València
8 Evolutionary Genomics Group , Departamento de Producción Vegetal y Microbiología, Universidad Miguel, Hernández,
9 UMH - Universidad Miguel Hernández [Elche]
10 IRSA - CNR Water Research Institute
11 Limnological Station , Department of Plant and Microbial Biology, University of Zurich
12 UZH - Universität Zürich [Zürich] = University of Zurich
13 Lake and Glacier Ecology Research Group , Department of Ecology, University of Innsbruck
14 Universität Innsbruck [Innsbruck]
15 Research Department for Limnology , Mondsee, University of Innsbruck
16 ESE - Ecologie Systématique et Evolution
17 LMGE - Laboratoire Microorganismes : Génome et Environnement
18 Department of Hydrobiology , Faculty of Biology, Institute of Ecology, Biological and Chemical Research Centre, University of Warsaw
19 UW - University of Warsaw
20 Aquatic Botany and Microbial Ecology Research Group, HUN-REN Balaton Limnological Research Institute
21 Department of Molecular Biology and Biotechnology , Faculty of Biology and Geology, Babeş-Bolyai University
22 Department of Ichthyology and Aquatic Environment, School of Agricultural Sciences, University of Thessaly, Greece
23 Division of Materials Chemistry, Ruđer Bošković Institute
24 Laboratory of Marine Microbiology, Institute of Oceanography and Fisheries
25 Department of Freshwater and Marine Ecology , Institute for Biodiversity and Ecosystem Dynamics, University of Amsterdam
26 UvA - University of Amsterdam [Amsterdam] = Universiteit van Amsterdam
27 IOW - Leibniz Institute for Baltic Sea Research Warnemünde
28 EMU - Estonian University of Life Sciences
29 Department of Aquatic Sciences and Assessment, Swedish University of Agricultural Sciences
30 Department of Ecology and Genetics/Limnology, Uppsala University
31 Uppsala University
32 BIOLOGICAL STATION LAKE NEUSIEDL ILLMITZ AUT
33 FEM - Fondazione Edmund Mach - Edmund Mach Foundation [Italie]
34 Institute of Microbiology, University of Applied Sciences and Arts of Southern Switzerland
35 Institute of Earth Sciences, University of Applied Sciences and Arts of Southern Switzerland
36 Department of Functional Ecology, Institute of Botany of the Czech Academy of Sciences
Purificación López-García
- Fonction : Auteur
- PersonId : 180850
- IdHAL : puri-lopez-garcia
- ORCID : 0000-0002-0927-0651
- IdRef : 075912422
David Moreira
- Fonction : Auteur
- PersonId : 174474
- IdHAL : david-moreira
- ORCID : 0000-0002-2064-5354
- IdRef : 155688820
Ludwig E Jardillier
- Fonction : Auteur
- PersonId : 1232307
- IdHAL : ludwig-jardillier
- ORCID : 0000-0003-4982-5807
Cécile Lepère
- Fonction : Auteur
- PersonId : 1161136
- ORCID : 0000-0003-4767-0477
Corinne Biderre-Petit
- Fonction : Auteur
- PersonId : 1161134
- ORCID : 0000-0001-7962-4171
Résumé
Telonemia are one of the oldest identified marine protists that for most part of their history have been recognized as a distinct incertae sedis lineage. Today, their evolutionary proximity to the SAR supergroup (Stramenopiles, Alveolates, and Rhizaria) is firmly established. However, their ecological distribution and importance as a natural predatory flagellate, especially in freshwater food webs, still remain unclear. To unravel the distribution and diversity of the phylum Telonemia in freshwater habitats, we examined over a thousand freshwater metagenomes from all over the world. In addition, to directly quantify absolute abundances, we analyzed 407 samples from 97 lakes and reservoirs using Catalyzed Reporter Deposition-Fluorescence in situ Hybridization (CARD-FISH). We recovered Telonemia 18S rRNA gene sequences from hundreds of metagenomic samples from a wide variety of habitats, indicating a global distribution of this phylum. However, even after this extensive sampling, our phylogenetic analysis did not reveal any new major clades, suggesting current molecular surveys are near to capturing the full diversity within this group. We observed excellent concordance between CARD-FISH analyses and estimates of abundances from metagenomes. Both approaches suggest that Telonemia are largely absent from shallow lakes and prefer to inhabit the colder hypolimnion of lakes and reservoirs in the Northern Hemisphere, where they frequently bloom, reaching 10%–20% of the total heterotrophic flagellate population, making them important predatory flagellates in the freshwater food web.
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